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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015816359.1_cds_XP_016498763.1_12755
CDS Infomation

[gene=LOC107817449] [db_xref=GeneID:107817449] [protein=non-canonical poly(A) RNA polymerase PAPD5-like] [protein_id=XP_016498763.1] [location=complement(join(23454..23900,24356..24400,24754..24802,24904..25001,26709..26759,27576..27635,27777..27857,27952..27994,33125..33195,33326..33421,34010..34066,34200..34312,35356..35707))] [gbkey=CDS]
Sequence

ATGGAGGTTGAGGGCATTTTGTACGAAACTCTCAGCCCTCTCTCCGCCGCCACTATCTCC
ACCACCGACCACCCACCTCCGTCGTCCTCCGACGAACATGAACCTTACCTCGTATTCCGC
AACGAAATTTCTCTATCTACTCTCCAATGTCCCTCACCGGAAACCGCCGTAGCCGATTAC
TTCTCACTTGACCTCGACGGCGACACCGCCGAGCTGAATAACGGTTCCGTTTCGACGCCG
GTGTCAGCTGCTGCTACTCCGTTGCCGGTTAAGGAAACAACGAGAGGACTTGAAGGCAAT
TGGTTTCGTGCTAATTGTCGGTTTAAGAGTCCTATGCTTCAGCTTCATAAGGAGATAATA
GATTTTTGTGAGTTTTTATCACCTACACCTGAGGAGCAAGCATCTCGTAATGCAGCCATA
GAATGTGTCTTTGATGTTATCAGATATATCTGGCCCAACTGCAAGCCAGAAGTCTTTGGA
TCATTCAAGACAGGGCTATATCTTCCCACAAGTGATGTTGATCTGGTGATTTTAGGGTCA
GATATTAGAAGTCCTCAACTTGGGTTACAAGCTCTTTCTAGGGCTCTCTCACAAAAAGGA
GTTGCAAAGAAGATACAGGTGATATCAAAGGCTCGTGTGCCAATAATCAAATTTGTGGAG
AAGAAAAGTGGCATTTCATTTGATATAAGTTTTGATGTGGAGAATGGACCCAGAGCTGCT
GAATTTATTAAGGATGCTATGTCTAACTGGCCCCCTCTACGACCATTATGTTTGATTTTG
AAAGTGTTCTTGCAACAGAGAGAGTTAAATGAGGTTTATACTGGTGGGATTGGTTCCTAT
GCGCTGCTTGTAATGCTCATAGCAATGTTGCAGAATCATCGAAATGGTCAAGCTTCTCCG
GAACAGAATTTGGGAATTCTTTTGGTTAGTTTCTTTGATATTTATGGACGCAAATTAAAT
ACATCAGATGTTGGTGTATCTTGTAATGGAGAAGGTACCTTCTTCCTGAAGAGTAGCAAA
GGGTTCTCAATTAAAGGGAAGCAATCTCTTATTTCTATTGAGGATCCACAGACACCAGAA
AATGACATTGGAAAGAGCTCCTTCAATTATTTTCAGGTCAGATCTGCTTTTGCGATGGCT
TTCACGACATTGACAAATGCAAAAGCCATATTTGGCCTAGGTCCCAACAGGAGTATTCTT
GGCACAATAATTAGACCAGATGAAATACTAGTGGAAAGGAAAGGGGGGTCCAATGGGGAA
GTGACTTTTACTAACTTGCTACCAGTCGCCGGGGAGGGACTGCAGCAGTATACCGACCAG
CAGGAAATCTATTGTAACTGGCGGTTAAATGATGACGATGAAGAAGCACTCCCTCGAGGA
AATGGGGTCGCAGAGGATGGTGGAGCGCTGCAGTCCTCAGGAAAGAAGAGGAAATCGTCA
AAGGAAAAAAAATCTGCTAAGAAGGTGAAAGAAAATGGGGAGAGTAGTAATGTTAGAGAT
GAAGGGAATTCCTCGAGGAAAGAGAAAAGTTCGAAGAAGCATTGGAAACATAATAGATGG
TGA

Peptide Sequence

PEP ID

XP_016498763.1
PEP Infomation

PREDICTED: non-canonical poly(A) RNA polymerase PAPD5-like [Nicotiana tabacum]
Sequence

MEVEGILYETLSPLSAATISTTDHPPPSSSDEHEPYLVFRNEISLSTLQCPSPETAVADY
FSLDLDGDTAELNNGSVSTPVSAAATPLPVKETTRGLEGNWFRANCRFKSPMLQLHKEII
DFCEFLSPTPEEQASRNAAIECVFDVIRYIWPNCKPEVFGSFKTGLYLPTSDVDLVILGS
DIRSPQLGLQALSRALSQKGVAKKIQVISKARVPIIKFVEKKSGISFDISFDVENGPRAA
EFIKDAMSNWPPLRPLCLILKVFLQQRELNEVYTGGIGSYALLVMLIAMLQNHRNGQASP
EQNLGILLVSFFDIYGRKLNTSDVGVSCNGEGTFFLKSSKGFSIKGKQSLISIEDPQTPE
NDIGKSSFNYFQVRSAFAMAFTTLTNAKAIFGLGPNRSILGTIIRPDEILVERKGGSNGE
VTFTNLLPVAGEGLQQYTDQQEIYCNWRLNDDDEEALPRGNGVAEDGGALQSSGKKRKSS
KEKKSAKKVKENGESSNVRDEGNSSRKEKSSKKHWKHNRW

Transcript Sequence

Gene sequence data has not been registered.